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  1. Há 1 dia · BLAST is designed to find regions of similarity between sequences, identifying species, locating genes, and understanding evolutionary relationships. The tool offers various types for different comparison needs, including BLASTP, BLASTN, BLASTX, TBLASTN, and TBLASTX. BLAST uses a heuristic search algorithm for efficient sequence comparison. It ...

  2. Há 5 dias · At present, Select data can be accessed via the Entez filter ("Bacteria"[Organism] OR "Archaea"[Organism] OR prokaryote[All Fields]) AND refseq_select[filter] in NCBI’s Protein databasee. Additional ways to access the data, including Blast databases, will be available soon.

  3. Há 1 dia · NCBI @ ISMB & BOSC 2024. We look forward to seeing you at the Intelligent Systems for Molecular Biology Conference (ISMB) and Bioinformatics Open Science Conference (BOSC) meetings taking place July 12-16, 2024 in-person in Montréal, Canada and virtually. We’ll be presenting on the latest updates to the NCBI Datasets , BLAST, and Protein ...

  4. Há 1 dia · Each designed primer or probe was first BLAST searched to evaluate in silico specificity. None of them exhibited significant similarities to other genera (data not shown). Primers and probes of six CoNS species were designed based on the gene targets described in previous publications ( Kwok et al., 1999 ; Hirotaki et al., 2011 ; Pizauro et al., 2017 ; Kim et al., 2021 ) and formulated into ...

  5. Há 15 horas · Reference sequences were downloaded from NCBI. The arc colours indicate different taxonomic clades. The tree was mid-point rerooted, ... NCBI nr database by BLAST 78.

  6. Há 1 dia · As shown in Fig. 6, only 10% of the WT rice seedlings survived while transgenic lines showed survival rates of as much as 65% for 4–9, 58% for 5–3 and 66% for 6–6, respectively. These results indicate that overexpression of ZmWRKY53 in rice leads to the improvement in cold tolerance. Fig. 6.

  7. Há 3 dias · To investigate the size of linear inverted repeats on the 742 Streptomyces linear chromosomes, we performed a BLAST search of the Streptomyces chromosome level chromosomes against itself with the following settings: blastn v2.10.0+, gapopen 2 gapextend 1, hit starting on the first 99 bp of the query and ending on the last 99 bp of the subject to account for end polishing artifacts.

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